PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thecc1EG026903t1
Common NameTCM_026903
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
Family BES1
Protein Properties Length: 210aa    MW: 22867 Da    PI: 8.4887
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thecc1EG026903t1genomeCGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822111.31.6e-3428103276
            DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr.kgskpl 76 
                       g gr +++ E+E++k RER+RRai++ i+ GLR++G+y+l  raD+n+Vl+ L++eAGwvve+DGttyr  +++++
  Thecc1EG026903t1  28 GRGRGRSEIEKERTKMRERQRRAITTNIFHGLRRHGGYHLFPRADINQVLRQLANEAGWVVEPDGTTYRsVSFSKT 103
                       568999999************************************************************3233333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.8E-3228127IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MQQRPQTIAA LICWTAFSFV KEMGEGRGRG RGRSEIEKER TKMRERQRRA ITTNIFHGLR  60
RHGGYHLFPR ADINQVLRQL ANEAGWVVEP DGTTYRSVSF SKTANCCPVC GAMKPITAPT  120
PSSSVVIGGG ECSTTASPRH NPVAAVEDPI RVIDSFCDNL IPIAPYIYGG EDGVSTLALQ  180
QLYPQEAAPP SQCMPPGSPL VRGNKEENI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007022864.11e-155Beta-amylase 7
TrEMBLA0A061G7D31e-155A0A061G7D3_THECC; Beta-amylase 7
STRINGVIT_10s0003g04710.t011e-45(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2294434
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.15e-19beta-amylase 7
Publications ? help Back to Top
  1. Motamayor JC, et al.
    The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
    Genome Biol., 2013. 14(6): p. r53
    [PMID:23731509]